Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015897211.1_cds_XP_016448083.1_42779
CDS Infomation

[gene=LOC107773147] [db_xref=GeneID:107773147] [protein=uncharacterized protein LOC107773147 isoform X5] [protein_id=XP_016448083.1] [location=complement(join(9285..9433,10274..10730,10770..11830,11937..12018,12534..12929,13670..13989,14097..14202,14349..14548,15934..15997))] [gbkey=CDS]
Sequence

ATGTTGGAGAATACCTTGAGAAAAAACTGCTGCTTCCAGAAGACTACTCCGTCTCTTCTT
TGGTCGACAGATCCTGGTAGACGCTATGGGAATCAAGCACGCCGCACTTGGCAGAGTTCT
GAGCATGATGGGCTTCTTGGAAGTGGTTCATTTCCCAAGCCATCTGCGTATGCATCTGGA
ATATCTGCAGCTAAGGTCCGAGCAAGTGATAACTATCAGCTTAATAGGAGCAATGAGCCA
TACCATCCTCCTCGCCCTTATAAGGCAATGCCTCATTCTCGTAGAAACACTGATGCATGC
AATGATGAGACCTTTGGTTCAATTGAGAGTGCAAGTGAGGACAGAGTGGAAGAGGAAAGG
AGGAGAAGAGCTTCTTTTGAGTTGATGAGGAAGGAACAGCAGAAGACTCTTCAAGAGAAG
CAGAAATCAAATGCAGAGAAGCATACAGCTGAGTATGACTCGGACATTTCAGTACTGCTG
GAAGATAATAAAAAGGATAGGAGGCTTCTGGACAAGAATGCTGAAGTTGATATAACGACC
AGCCAGCCTTTTGCAAACAATGAATCTGGAAAATCATCTTCCTCTTCACAGAATCTCCCA
TCTAGACCACTTGTGCCCCCAGGCTTCAAAACCACTGTTTCAGATAAGAATTCTGGCTCA
GCAACTTTGAACCATTCATGTTTGACAGAGATAGGAAAGCATGAAACTGAAGAAATTCTA
TTGGAAGCCAAGTCCGACGCCCAAAATGGTATCTATCAGAGCTTAGAAAGACAAAGTTCC
CGAGAAATTAGTTCGAGTGATCAACTTGAACGCAAGAGTTTGCATGCTTCAATTCTGAAG
AAGAATGACCAAATTGTGAACTTATCAGTGAACTCAGATGATTCTGACAGGAAATATAGC
ATGGAAGATCATTCACGCCGGACTTCAAGTCTAGATTTAAACGAGCCTGCAATTTTGGAA
CTCAGTGCCCAGAATTCAGGGGGCAAATTTGTTGCGGAGTCCAATATCAACCATTCAACA
TCTATCCTGGATAAGATTTTTGGAAGTGCCATTGCAAATCTCACCGACTCTGATGCTCCA
GTTATGAATGAAGATAGTAAGCCTAATGACAAATTAGACCCCAAAGCTGTTCAGTCATCA
AAATTTGCTCATTGGTTTTTCGAAGAAGAAAGGAAGCTGGAAGATGATTCTTCATCAAGT
AGGCCTAGTGATTTGCTTGCATTAATTGTTGGTGGTGATAAAAACAGAAAGCAACCCTTT
GAGGGTAATACTTCGGAACAATTACCATCAGAATTCTCCTATCAAAGTCTTGAGCCTACA
AGTAAGTTTGTCTCGAATTTACCTTCTTCACTGCTTGCCGGGCCTGAGCTTGTGTATAAG
TCCAGTAAAAGGGAGGCAGCACCGATGATCCTTACTTGTGAAGACCTTGAGCATACAATG
TTGTCAGAGTTCAGCGAAAAAAAGTCTAGTTCACAGCCACAAGGCTGGAGTACTAATCGC
ACAAAGACTGAAAAACCTGTAAATGTGGATAGCCAGGCATCTCAGCACCTCCTTTCATTA
TTACAGAAGGGGCCAAATCTTGGAAATGTGACACAGAGGTCCAATGCTGGCATTGAATCA
TTGGAGGCACATGGTGAGACTACCGTGCAAGACAGATCTAAGAAGGAAGATAACAATAGT
CATGCTTCAGGGAATACACTTACTCTTGAATCACTTTTTGGAACTGCTTTTATGACGGAA
TTACAATCTGCACAAGCTCCAGTTTCAGTTCAGAGGATTTCAGTTGGTTCTGGGCTAAAT
GATTCTCAGGAATCTCAAAAGTCGTCATTGCCTAGTTCTGACGATACCCTTTCTTCTTCG
ATAATTGATGATATTGGACTGAGAGGAGCAACGAAGGAGAATAATGTCTTACCTTCAAAG
TGCAGAGATCACTCAAAGCTGGATAAGGCAGAAAACTGGTTGGGATTCAATGATTCTTCG
TTTGAAGTCAACTCCTTAAAGCGCCAAACTGAAGCGCTGTCCAGAAATGGTGATTATCGG
GCTGGTGAATTTCGTCTACCTGAAGGAGAGAGCTTATTTAGTGTTGGTGATCCTTTGGTA
TCCCAGGTCCCAATGCCAGCAGGAAATATGAGTAAAGGTGACCTGGTGACTGTTAATTCA
GTTGGCAGTGATCAAAGGTCTTTGGTGGGTCCAGGGGCACTACCCTTTCCACGAGTTTCT
CATGACCAGATTGAGTCTCAGATGCTTTTTCACCATCTTCGTGCTCAACCATCATCTTCT
CAGTTTCATCCTTTGCAAATGAGTCAAGGGAAACCATTACTTCATCAATTGGATTCTCGT
CCTGCACATTTGAACTCTCAGATTTTCTCTGGTCCAGAGGGCATGATTCAGCACGATGCT
CTTCCCGGTCATCAGTTTGCCGGAAGTATGATGAGACCTCCATTTCACCATCCGAATGCT
AGGGTGACAGGATTTGATCTTCCTGCTCATCATCCTATGTTGCAGCAGATGCAAATGTCT
GGAACTCACCCCCCTCATCTGCTACATGACCGTCTAAACAGTGGTCCAGTTCCTTCACAT
TCCAGTAATCAGGCTGCTGGCTTTGTGCATGAAGCTAACCCGATGCAAGGGTTCCCTTTT
ACGTCTCACCAAGTCAACATTAATGGACTTGGGATGCAAGTTCCAGATATCAACAGCAGA
AACAATCATCCTGAGGCCCTGCAAAGGATTATTGAGATGGAGCTTAAGGCTTCAAAGCAG
AATCACACTTTTCCTGCTGGGCGTGGACAGGGGATGTACGGCCACGAGCTTGACATGGGA
TTGCGATATAGATAG

Peptide Sequence

PEP ID

XP_016448083.1
PEP Infomation

PREDICTED: uncharacterized protein LOC107773147 isoform X5 [Nicotiana tabacum]
Sequence

MLENTLRKNCCFQKTTPSLLWSTDPGRRYGNQARRTWQSSEHDGLLGSGSFPKPSAYASG
ISAAKVRASDNYQLNRSNEPYHPPRPYKAMPHSRRNTDACNDETFGSIESASEDRVEEER
RRRASFELMRKEQQKTLQEKQKSNAEKHTAEYDSDISVLLEDNKKDRRLLDKNAEVDITT
SQPFANNESGKSSSSSQNLPSRPLVPPGFKTTVSDKNSGSATLNHSCLTEIGKHETEEIL
LEAKSDAQNGIYQSLERQSSREISSSDQLERKSLHASILKKNDQIVNLSVNSDDSDRKYS
MEDHSRRTSSLDLNEPAILELSAQNSGGKFVAESNINHSTSILDKIFGSAIANLTDSDAP
VMNEDSKPNDKLDPKAVQSSKFAHWFFEEERKLEDDSSSSRPSDLLALIVGGDKNRKQPF
EGNTSEQLPSEFSYQSLEPTSKFVSNLPSSLLAGPELVYKSSKREAAPMILTCEDLEHTM
LSEFSEKKSSSQPQGWSTNRTKTEKPVNVDSQASQHLLSLLQKGPNLGNVTQRSNAGIES
LEAHGETTVQDRSKKEDNNSHASGNTLTLESLFGTAFMTELQSAQAPVSVQRISVGSGLN
DSQESQKSSLPSSDDTLSSSIIDDIGLRGATKENNVLPSKCRDHSKLDKAENWLGFNDSS
FEVNSLKRQTEALSRNGDYRAGEFRLPEGESLFSVGDPLVSQVPMPAGNMSKGDLVTVNS
VGSDQRSLVGPGALPFPRVSHDQIESQMLFHHLRAQPSSSQFHPLQMSQGKPLLHQLDSR
PAHLNSQIFSGPEGMIQHDALPGHQFAGSMMRPPFHHPNARVTGFDLPAHHPMLQQMQMS
GTHPPHLLHDRLNSGPVPSHSSNQAAGFVHEANPMQGFPFTSHQVNINGLGMQVPDINSR
NNHPEALQRIIEMELKASKQNHTFPAGRGQGMYGHELDMGLRYR

Transcript Sequence

Gene sequence data has not been registered.